Top workflows by tests

modelblocks-org

module_demand_electricity

A module to prepare demand profiles for Europe at arbitrary spatial resolution, based on ENTSO-E his…

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Updated: 2026-07-18 Release: v0.1.0formatting: passedlinting: passed

0 stars

0 watchers

snakemake-workflows

rna-seq-xengsort

A standardized Snakemake workflow to separate host and graft sequencing reads from RNAseq data using…

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Updated: 2026-07-17 Release: v1.0.0formatting: passedlinting: passed

0 stars

0 watchers

modelblocks-org

module_powerplants

Harmonised global powerplant data at any resolution 🏭⚡

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Updated: 2026-07-17 Release: v0.1.0formatting: passedlinting: passed

1 stars

2 watchers

modelblocks-org

module_euro_gas_grid

A module to create disaggregated gas grid networks and H2 retrofits for European countries.

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Updated: 2026-07-17 Release: v0.1.3formatting: passedlinting: passed

0 stars

0 watchers

snakemake-workflows

dna-seq-varlociraptor

A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/nor…

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Updated: 2026-07-16 Release: v6.9.2formatting: passedlinting: passed

90 stars

6 watchers

snakemake-workflows

dna-seq-benchmark

A snakemake workflow for benchmarking variant calling approaches with Genome in a Bottle (GIAB), CHM…

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Updated: 2026-07-15 Release: v1.17.0formatting: passedlinting: passed

13 stars

0 watchers

MPUSP

snakemake-simple-mapping

A Snakemake workflow for the mapping of reads to reference genomes, minimalistic and simple.

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Updated: 2026-07-15 Release: v1.7.2formatting: passedlinting: passed

1 stars

1 watchers

MPUSP

snakemake-crispr-guides

A Snakemake workflow for the design of small guide RNAs (sgRNAs) for CRISPR applications.

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Updated: 2026-07-14 Release: v1.7.2formatting: passedlinting: passed

8 stars

1 watchers

westerdijk-wm

snakemake-mlsa-ani

Snakemake workflow for MLSA and ANI analysis

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Updated: 2026-07-13 Release: v1.0.0formatting: passedlinting: passed

1 stars

1 watchers

snakemake-workflows

single-cell-counts-preprocessing

A standardised Snakemake workflow for preprocessing of single-cell RNAseq count data following singl…

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Updated: 2026-07-13 Release: Noneformatting: passedlinting: passed

0 stars

0 watchers

modelblocks-org

module_co2stop_cdr

A module to aggregate European CDR potential from the CO2Stop dataset into flexible spatial resoluti…

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Updated: 2026-07-09 Release: v0.1.5formatting: passedlinting: passed

0 stars

0 watchers

modelblocks-org

module_hydropower

Calculate hydropower inflow timeseries around the globe 🌊

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Updated: 2026-07-09 Release: v0.2.2formatting: passedlinting: passed

0 stars

2 watchers

b-brankovics

smkwf-oligo-screening

Snakemake workflow for screening olignucleotide anealing sites and identifying PCR amplicon regions

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Updated: 2026-07-08 Release: Noneformatting: passedlinting: passed

0 stars

0 watchers

modelblocks-org

module_area_potentials

Geospatial analysis to determine available land area for energy infrastructure

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Updated: 2026-07-08 Release: v0.1.0formatting: passedlinting: passed

1 stars

0 watchers

b-brankovics

smkwf-STRAf-typing

Snakemake workflow for STRAf typing Aspergillus fumigatus genome assemblies

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Updated: 2026-07-08 Release: Noneformatting: passedlinting: passed

0 stars

0 watchers