Imports SplAdder output from a given path with ".confirmed.txt.gz" files. The results for one patient should be stored in the given path. Please note that multiple (coordinated) exons skips (mult_exon_skip) are currently not supported.

Imports SplAdder output from a given path with ".confirmed.txt.gz" files. The results for one patient should be stored in the given path. Please note that multiple (coordinated) exons skips (mult_exon_skip) are currently not supported.

import_spladder(path)

Arguments

path

The path to a folder with SplAdder output. This folder must contain the ".confirmed.txt.gz" files for the alternative splicing type of interest.

Value

A list with tibbles. Each tibble is a SplAdder output for "A5SS", "A3SS", "cassette_exon", "intron_retention", "mutex_exons".