This is a wrapper function to directly map the information if a junction predicted from WES data was found in RNA-seq by Regtools or SplAdder

Source: R/standardize_junctions_RNA_tools.R

This is a wrapper function to directly map the information if a junction predicted from WES data was found in RNA-seq by Regtools or SplAdder

add_identified_in_RNA(mutation_juncs, path_to_spladder, path_to_regtools)

Arguments

mutation_juncs

The junction-transcript centric data predicted from WES data.

path_to_spladder

The path to the results from RNA-seq analysis with SplAdder

path_to_regtools

The path to the results from RNA-seq analysis with Regtools

Value

The junction-transcript centric data predicted from WES data is extended by the information if a respective aberrant junctions was identified by spladder or regtools (identified_by_regtools, identified_by_spladder)